No. words: 887; after pruning: 861


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:420)  386  0.00 0.95 0.24  KSU006_D07_BE637507As01P009B04B101F1_058.ab1        1   421 (34)  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   (8)   424     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   432 
   83    KSU006_D07_BE637507As01P009B04B101F1_058.ab1    71 
   99  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   334 
  107    KSU006_D07_BE637507As01P009B04B101F1_058.ab1    95 
  115  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   318 
  139    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   127 
  143  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   290 
  151    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   139 
  155  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   278 
  159    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   147 
  219  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   214 
  231    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   219 
  279  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   154 
  283    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   271 
  287  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1   146 
  291    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   279 
  343  C KSU007_D07_BE637507As01P009B04B101R1_058.ab1    90 
  363    KSU006_D07_BE637507As01P009B04B101F1_058.ab1   351 
Contig length: old 466, new 467

Contig length: old 467, new 467
New start: 0