No. words: 1259; after pruning: 1233


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:591)  560  0.68 0.00 0.00  KSU006_F12_BE637729Tu01P009C04C101F1_095.ab1        1   592 (42)  C KSU007_F12_BE637729Tu01P009C04C101R1_095.ab1   (33)   592     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C KSU007_F12_BE637729Tu01P009C04C101R1_095.ab1   625 
   44    KSU006_F12_BE637729Tu01P009C04C101F1_095.ab1    11 
  532  C KSU007_F12_BE637729Tu01P009C04C101R1_095.ab1    94 
  620    KSU006_F12_BE637729Tu01P009C04C101F1_095.ab1   587 
Contig length: old 667, new 667

Contig length: old 667, new 667
New start: 0