No. words: 1003; after pruning: 977


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.5 (1,1:469)  448  0.00 0.00 0.21  KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1        1   470 (32)  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   (32)   469     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   501 
   83    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1    51 
   87  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   415 
   99    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1    67 
  111  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   391 
  143    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   111 
  151  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   351 
  167    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   135 
  171  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   331 
  179    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   147 
  191  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   311 
  219    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   187 
  243  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   259 
  251    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   219 
  255  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   247 
  275    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   243 
  279  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   223 
  303    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   271 
  327  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   175 
  331    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   299 
  347  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   155 
  359    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   327 
  367  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1   135 
  383    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   351 
  419  C KSU007_G12_BF145268Tu01P009D04D101R1_088.ab1    83 
  439    KSU006_G12_BF145268Tu01P009D04D101F1_088.ab1   407 
Contig length: old 533, new 534

Contig length: old 534, new 534
New start: 0