No. words: 1425; after pruning: 1399


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:974)  428  0.00 0.00 0.00  KSU006_G07_BF202706As01P009F04F101F1_052.ab1      221   670 (0)  C KSU007_G07_BF202706As01P009F04F101R1_052.ab1   (0)   755   306 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1    KSU006_G07_BF202706As01P009F04F101F1_052.ab1     1 
  360  C KSU007_G07_BF202706As01P009F04F101R1_052.ab1   616 
  364    KSU006_G07_BF202706As01P009F04F101F1_052.ab1   364 
  408  C KSU007_G07_BF202706As01P009F04F101R1_052.ab1   568 
  424    KSU006_G07_BF202706As01P009F04F101F1_052.ab1   424 
  440  C KSU007_G07_BF202706As01P009F04F101R1_052.ab1   536 
  464    KSU006_G07_BF202706As01P009F04F101F1_052.ab1   464 
  472  C KSU007_G07_BF202706As01P009F04F101R1_052.ab1   504 
Contig length: old 975, new 975

Contig length: old 975, new 975
New start: 0