No. words: 1653; after pruning: 1627


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:897)  728  0.26 0.00 0.00  KSU008_D09_BF202706At01P009F04F101F1_074.ab1       50   804 (0)  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   (0)   849    95 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    KSU008_D09_BF202706At01P009F04F101F1_074.ab1     1 
  385  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   514 
  389    KSU008_D09_BF202706At01P009F04F101F1_074.ab1   389 
  417  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   482 
  425    KSU008_D09_BF202706At01P009F04F101F1_074.ab1   425 
  429  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   470 
  433    KSU008_D09_BF202706At01P009F04F101F1_074.ab1   433 
  469  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   430 
  477    KSU008_D09_BF202706At01P009F04F101F1_074.ab1   477 
  485  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   414 
  533    KSU008_D09_BF202706At01P009F04F101F1_074.ab1   533 
  537  C KSU009_D09_BF202706At01P009F04F101R1_074.ab1   362 
Contig length: old 898, new 898

Contig length: old 898, new 898
New start: 0