No. words: 1955; after pruning: 1929


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.2 (1,1:945)  901  0.11 0.00 0.21  KSU050_F04_BF202706Tu02P009F04F0101F1_022.ab1        1   947 (23)  C KSU051_F04_BF202706Tu02P009F04F0101R1_022.ab1   (40)   945     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  468 nodes

 236 str. conn. components

Path
    1  C KSU051_F04_BF202706Tu02P009F04F0101R1_022.ab1   985 
   44    KSU050_F04_BF202706Tu02P009F04F0101F1_022.ab1     4 
  200  C KSU051_F04_BF202706Tu02P009F04F0101R1_022.ab1   786 
  204    KSU050_F04_BF202706Tu02P009F04F0101F1_022.ab1   164 
  656  C KSU051_F04_BF202706Tu02P009F04F0101R1_022.ab1   330 
  664    KSU050_F04_BF202706Tu02P009F04F0101F1_022.ab1   624 
  716  C KSU051_F04_BF202706Tu02P009F04F0101R1_022.ab1   270 
  979    KSU050_F04_BF202706Tu02P009F04F0101F1_022.ab1   941 
Contig length: old 1009, new 1008

Contig length: old 1008, new 1008
New start: 0