No. words: 1084; after pruning: 1044


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:512)  493  0.00 0.39 0.00  KSU008_F09_BF428978At01P009H04H101F1_075.ab1        1   512 (30)  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   (28)   514     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   542 
   51    KSU008_F09_BF428978At01P009H04H101F1_075.ab1    22 
   55  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   488 
   75    KSU008_F09_BF428978At01P009H04H101F1_075.ab1    46 
   91  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   452 
  119    KSU008_F09_BF428978At01P009H04H101F1_075.ab1    90 
  123  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   420 
  127    KSU008_F09_BF428978At01P009H04H101F1_075.ab1    98 
  139  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   404 
  143    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   114 
  151  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   392 
  167    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   138 
  218  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   324 
  222    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   193 
  294  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   248 
  298    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   269 
  310  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   232 
  314    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   285 
  370  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   172 
  382    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   353 
  426  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1   116 
  454    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   425 
  518  C KSU009_F09_BF428978At01P009H04H101R1_075.ab1    24 
  526    KSU008_F09_BF428978At01P009H04H101F1_075.ab1   497 
Contig length: old 571, new 571

Contig length: old 571, new 571
New start: 0