No. words: 1087; after pruning: 1047


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:514)  499  0.00 0.19 0.00  KSU008_D05_BF428978At02P009H04H101F1_042.ab1        1   514 (32)  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   (26)   515     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   541 
   67    KSU008_D05_BF428978At02P009H04H101F1_042.ab1    41 
   71  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   471 
   75    KSU008_D05_BF428978At02P009H04H101F1_042.ab1    49 
   83  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   459 
  119    KSU008_D05_BF428978At02P009H04H101F1_042.ab1    93 
  123  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   419 
  151    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   125 
  155  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   387 
  163    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   137 
  198  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   343 
  222    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   196 
  230  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   311 
  238    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   212 
  246  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   295 
  250    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   224 
  310  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   231 
  314    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   288 
  322  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   219 
  326    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   300 
  350  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   191 
  354    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   328 
  370  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   171 
  382    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   356 
  410  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1   131 
  446    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   420 
  458  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1    83 
  462    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   436 
  466  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1    75 
  478    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   452 
  506  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1    35 
  510    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   484 
  514  C KSU009_D05_BF428978At02P009H04H101R1_042.ab1    27 
  530    KSU008_D05_BF428978At02P009H04H101F1_042.ab1   504 
Contig length: old 572, new 572

Contig length: old 572, new 572
New start: 0