No. words: 1609; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:1029)  557  0.52 0.17 0.00  KSU016_C10_BF482960Ld11P006A06A121F1_076.ab1      261   838 (0)  C KSU017_C10_BF482960Ld11P006A06A121R1_076.ab1   (0)   771   193 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1    KSU016_C10_BF482960Ld11P006A06A121F1_076.ab1     1 
  504  C KSU017_C10_BF482960Ld11P006A06A121R1_076.ab1   528 
Contig length: old 1030, new 1031

Contig length: old 1031, new 1031
New start: 0