No. words: 1327; after pruning: 1301


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:1118)  203  0.00 0.00 0.00  KSU016_G10_BF482960Ld15P006A06A121F1_068.ab1      453   660 (0)  C KSU017_G10_BF482960Ld15P006A06A121R1_068.ab1   (0)   667   460 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1    KSU016_G10_BF482960Ld15P006A06A121F1_068.ab1     1 
  552  C KSU017_G10_BF482960Ld15P006A06A121R1_068.ab1   568 
Contig length: old 1119, new 1119

Contig length: old 1119, new 1119
New start: 0