No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.1 -0.1 (1,1:463)  372  3.66 0.43 0.65  KSU016_D12_BF483640Ld12P006C06C121F1_090.ab1        1   464 (268)  C KSU017_D12_BF483640Ld12P006C06C121R1_090.ab1   (156)   464     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.1       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1  C KSU017_D12_BF483640Ld12P006C06C121R1_090.ab1   620 
  172    KSU016_D12_BF483640Ld12P006C06C121F1_090.ab1    16 
  180  C KSU017_D12_BF483640Ld12P006C06C121R1_090.ab1   441 
  194    KSU016_D12_BF483640Ld12P006C06C121F1_090.ab1    37 
Contig length: old 888, new 889

Contig length: old 889, new 889
New start: 0