No. words: 1807; after pruning: 1781


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:1057)  729  0.13 0.00 0.00  KSU050_H05_BG606980Tu02P009H05H0111F1_033.ab1      114   862 (0)  C KSU051_H05_BG606980Tu02P009H05H0111R1_033.ab1   (0)   945   197 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1    KSU050_H05_BG606980Tu02P009H05H0111F1_033.ab1     1 
  683  C KSU051_H05_BG606980Tu02P009H05H0111R1_033.ab1   376 
Contig length: old 1058, new 1058

Contig length: old 1058, new 1058
New start: 0