No. words: 877; after pruning: 851


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:274)  261  0.00 0.00 0.00  KSU014_B11_BM135193Ld02P006F06F121F1_093.ab1        1   275 (180)  C KSU015_B11_BM135193Ld02P006F06F121R1_093.ab1   (147)   275     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C KSU015_B11_BM135193Ld02P006F06F121R1_093.ab1   422 
  275    KSU014_B11_BM135193Ld02P006F06F121F1_093.ab1   128 
  283  C KSU015_B11_BM135193Ld02P006F06F121R1_093.ab1   140 
  311    KSU014_B11_BM135193Ld02P006F06F121F1_093.ab1   164 
Contig length: old 602, new 602

Contig length: old 602, new 602
New start: 0