No. words: 1251; after pruning: 1225


Histogram of relative pair offsets, for read pairs with multiple alignments:
 1     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:595)  573  0.17 0.00 0.00  KSU004_A06_BM137730As01P006G06G121F1_037.ab1        1   596 (30)  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   (29)   596     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   625 
   33    KSU004_A06_BM137730As01P006G06G121F1_037.ab1     4 
   37  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   589 
   45    KSU004_A06_BM137730As01P006G06G121F1_037.ab1    16 
   49  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   577 
   61    KSU004_A06_BM137730As01P006G06G121F1_037.ab1    32 
   65  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   561 
   77    KSU004_A06_BM137730As01P006G06G121F1_037.ab1    48 
   81  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   545 
   97    KSU004_A06_BM137730As01P006G06G121F1_037.ab1    68 
  117  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   509 
  141    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   112 
  161  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   465 
  181    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   152 
  189  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   437 
  193    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   164 
  201  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   425 
  205    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   176 
  253  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   373 
  261    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   232 
  333  C KSU005_A06_BM137730As01P006G06G121R1_037.ab1   293 
  341    KSU004_A06_BM137730As01P006G06G121F1_037.ab1   312 
Contig length: old 655, new 655

Contig length: old 655, new 655
New start: 0