No. words: 1201; after pruning: 1175


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:445)  420  0.00 0.22 0.22  KSU016_A02_BM137730Ld09P006G06G121F1_016.ab1        1   446 (142)  C KSU017_A02_BM137730Ld09P006G06G121R1_016.ab1   (167)   446     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C KSU017_A02_BM137730Ld09P006G06G121R1_016.ab1   613 
  267    KSU016_A02_BM137730Ld09P006G06G121F1_016.ab1   100 
Contig length: old 755, new 755

Contig length: old 755, new 755
New start: 0