No. words: 1487; after pruning: 1433


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:612)  593  0.49 0.16 0.00  KSU045_A11_BM138642Ld13P006H06H121F2_095.ab1        1   613 (154)  C KSU046_A11_BM138642Ld13P006H06H121R2_095.ab1   (106)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C KSU046_A11_BM138642Ld13P006H06H121R2_095.ab1   720 
  118    KSU045_A11_BM138642Ld13P006H06H121F2_095.ab1    12 
  690  C KSU046_A11_BM138642Ld13P006H06H121R2_095.ab1    30 
  701    KSU045_A11_BM138642Ld13P006H06H121F2_095.ab1   595 
Contig length: old 874, new 873

Contig length: old 873, new 873
New start: 0 
S Change at: 771; seg lengths: entry 1, contig 1