No. words: 1023; after pruning: 997


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:353)  348  0.00 0.00 0.00  KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1        1   354 (178)  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   (137)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   491 
  161    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1    24 
  169  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   323 
  177    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1    40 
  181  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   311 
  185    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1    48 
  237  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   255 
  241    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   104 
  297  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   195 
  301    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   164 
  329  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1   163 
  393    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   256 
  405  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1    87 
  417    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   280 
  421  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1    71 
  437    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   300 
  445  C KSU044_D10_BQ160019Ld04P009D06D121R2_074.ab1    47 
  465    KSU043_D10_BQ160019Ld04P009D06D121F2_074.ab1   328 
Contig length: old 669, new 669

Contig length: old 669, new 669
New start: 0