No. words: 1624; after pruning: 1598


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:1221)  384  0.25 0.25 0.00  MoSU003F_A06_BE352570Ld03P005A03A091F1_037.ab1      364   764 (0)  C MoSU003R_A06_BE352570Ld03P005A03A091R1_037.ab1   (0)   860   459 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1    MoSU003F_A06_BE352570Ld03P005A03A091F1_037.ab1     1 
  571  C MoSU003R_A06_BE352570Ld03P005A03A091R1_037.ab1   652 
  575    MoSU003F_A06_BE352570Ld03P005A03A091F1_037.ab1   575 
  611  C MoSU003R_A06_BE352570Ld03P005A03A091R1_037.ab1   612 
  631    MoSU003F_A06_BE352570Ld03P005A03A091F1_037.ab1   631 
  639  C MoSU003R_A06_BE352570Ld03P005A03A091R1_037.ab1   584 
Contig length: old 1222, new 1222

Contig length: old 1222, new 1222
New start: 0