No. words: 1058; after pruning: 1032


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.0 (1,1:394)  385  0.26 0.26 0.00  MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1        4   395 (142)  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   (128)   393     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   521 
  283    MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1   157 
  287  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   235 
  299    MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1   173 
  311  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   211 
  335    MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1   209 
  403  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   119 
  415    MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1   289 
  419  C MoSU005R_A10_BE352570Ld03P015G03G091R1_069.ab1   103 
  423    MoSU005F_A10_BE352570Ld03P015G03G091F1_069.ab1   297 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0