No. words: 1067; after pruning: 1041


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:397)  391  0.25 0.25 0.00  MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1        1   398 (133)  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   (137)   399     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   536 
  185    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1    47 
  189  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   348 
  205    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1    67 
  229  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   308 
  237    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1    99 
  241  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   296 
  289    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   151 
  293  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   244 
  297    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   159 
  301  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   236 
  313    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   175 
  321  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   216 
  341    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   203 
  401  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   136 
  405    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   267 
  433  C MoSU005R_B10_BE352570Ld04P015G03G091R1_077.ab1   104 
  437    MoSU005F_B10_BE352570Ld04P015G03G091F1_077.ab1   299 
Contig length: old 669, new 669

Contig length: old 669, new 669
New start: 0