No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:395)  392  0.00 0.25 0.00  MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1        1   396 (128)  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   (138)   397     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  196 nodes

 100 str. conn. components

Path
    1  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   535 
  213    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1    74 
  217  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   319 
  221    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1    82 
  229  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   307 
  249    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   110 
  253  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   283 
  265    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   126 
  273  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   263 
  289    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   150 
  301  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   235 
  309    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   170 
  333  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   203 
  345    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   206 
  349  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   187 
  373    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   234 
  417  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   119 
  421    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   282 
  433  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1   103 
  441    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   302 
  485  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1    51 
  489    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   350 
  501  C MoSU005R_E10_BE352570Ld07P015G03G091R1_071.ab1    35 
  505    MoSU005F_E10_BE352570Ld07P015G03G091F1_071.ab1   366 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0