No. words: 1529; after pruning: 1503


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:1220)  299  0.32 0.00 0.00  MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1      465   772 (0)  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   (0)   757   450 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1    MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1     1 
  568  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   654 
  580    MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1   580 
  596  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   626 
  604    MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1   604 
  624  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   598 
  644    MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1   644 
  648  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   574 
  652    MoSU003F_F06_BE352570Ld08P005A03A091F1_047.ab1   652 
  656  C MoSU003R_F06_BE352570Ld08P005A03A091R1_047.ab1   566 
Contig length: old 1221, new 1221

Contig length: old 1221, new 1221
New start: 0