No. words: 1075; after pruning: 1049


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:401)  382  0.50 0.50 0.25  MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1        1   402 (135)  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   (135)   403     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  192 nodes

 98 str. conn. components

Path
    1  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   538 
  256    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   120 
  264  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   275 
  300    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   164 
  304  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   235 
  312    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   176 
  340  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   199 
  348    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   212 
  352  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   187 
  356    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   220 
  388  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   151 
  392    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   256 
  404  C MoSU005R_G10_BE352570Ld09P015G03G091R1_072.ab1   135 
  408    MoSU005F_G10_BE352570Ld09P015G03G091F1_072.ab1   272 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0