No. words: 1326; after pruning: 1300


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:695)  511  0.73 0.00 0.00  MoSU017F_F11_BE352570Sn26P005A03P023G071F1_085.ab1      148   696 (81)  C MoSU017R_F11_BE352570Sn26P005A03P023G071R1_085.ab1   (0)   549     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1    MoSU017F_F11_BE352570Sn26P005A03P023G071F1_085.ab1     1 
  555  C MoSU017R_F11_BE352570Sn26P005A03P023G071R1_085.ab1   142 
  607    MoSU017F_F11_BE352570Sn26P005A03P023G071F1_085.ab1   607 
  615  C MoSU017R_F11_BE352570Sn26P005A03P023G071R1_085.ab1    82 
  655    MoSU017F_F11_BE352570Sn26P005A03P023G071F1_085.ab1   655 
  674  C MoSU017R_F11_BE352570Sn26P005A03P023G071R1_085.ab1    23 
  682    MoSU017F_F11_BE352570Sn26P005A03P023G071F1_085.ab1   682 
Contig length: old 777, new 777

Contig length: old 777, new 777
New start: 0