No. words: 1556; after pruning: 1530


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 15.8 (1,1:735)  700  0.00 0.14 0.14  MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1        6   736 (47)  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   (42)   731     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   773 
   52    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1    14 
   72  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   702 
   76    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1    38 
  580  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   194 
  584    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1   546 
  644  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   130 
  648    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1   610 
  652  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1   122 
  720    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1   682 
  732  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1    42 
  736    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1   698 
  744  C MoSU017R_D12_BE352570Sn31P005A03P023G071R1_090.ab1    30 
  760    MoSU017F_D12_BE352570Sn31P005A03P023G071F1_090.ab1   722 
Contig length: old 820, new 821

Contig length: old 821, new 821
New start: 0