No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:648)  612  0.00 0.31 0.15  MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1        1   649 (32)  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   (25)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   675 
  130    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   104 
  138  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   538 
  142    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   116 
  174  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   502 
  222    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   196 
  438  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   238 
  518    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   492 
  534  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1   142 
  554    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   528 
  582  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1    94 
  590    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   564 
  594  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1    82 
  606    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   580 
  618  C MoSU017R_B08_BE352570Ta12P005A03P023B071R1_062.ab1    58 
  638    MoSU017F_B08_BE352570Ta12P005A03P023B071F1_062.ab1   612 
Contig length: old 707, new 707

Contig length: old 707, new 707
New start: 0