No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:617)  564  1.13 0.16 0.16  MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1        1   618 (74)  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   (46)   618     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   664 
   73    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1    26 
   77  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   588 
   93    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1    46 
  105  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   560 
  113    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1    66 
  129  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   536 
  137    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1    90 
  141  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   524 
  173    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1   126 
  177  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   488 
  253    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1   206 
  385  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   280 
  541    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1   494 
  549  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   116 
  557    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1   510 
  565  C MoSU017R_C08_BE352570Ta13P005A03P023B071R1_060.ab1   100 
  569    MoSU017F_C08_BE352570Ta13P005A03P023B071F1_060.ab1   522 
Contig length: old 738, new 739

Contig length: old 739, new 739
New start: 0