No. words: 1332; after pruning: 1306


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:619)  581  0.32 0.00 0.32  MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1        1   621 (43)  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   (49)   619     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   668 
   53    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1     4 
  255  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   414 
  263    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   214 
  355  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   314 
  359    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   310 
  367  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   302 
  375    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   326 
  387  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   282 
  403    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   354 
  411  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   258 
  483    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   434 
  487  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   182 
  515    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   466 
  523  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   146 
  531    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   482 
  535  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   134 
  539    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   490 
  543  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   126 
  547    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   498 
  551  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1   118 
  627    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   578 
  631  C MoSU017R_D08_BE352570Ta14P005A03P023B071R1_058.ab1    38 
  644    MoSU017F_D08_BE352570Ta14P005A03P023B071F1_058.ab1   596 
Contig length: old 712, new 712

Contig length: old 712, new 713
New start: 0 
I Change at: 642; seg lengths: entry 1, contig 0