No. words: 1564; after pruning: 1538


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.6 (1,1:754)  721  0.13 0.13 0.13  MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1        1   755 (24)  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   (30)   755     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   785 
   43    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1    12 
   47  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   739 
   59    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1    28 
  533  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   253 
  621    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   590 
  625  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   161 
  645    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   614 
  649  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1   137 
  713    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   682 
  725  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1    61 
  741    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   710 
  749  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1    37 
  753    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   722 
  757  C MoSU017R_B10_BE352570Ta14P005A03P023G071R1_078.ab1    29 
  765    MoSU017F_B10_BE352570Ta14P005A03P023G071F1_078.ab1   734 
Contig length: old 809, new 810

Contig length: old 810, new 810
New start: 0