No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 15.1 (1,1:808)  702  0.00 0.00 0.00  MoSU017F_D05_BE352570Ta14P023C06P005A091F1_041.ab1        3   721 (0)  C MoSU017R_D05_BE352570Ta14P023C06P005A091R1_041.ab1   (39)   807    89 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1  C MoSU017R_D05_BE352570Ta14P023C06P005A091R1_041.ab1   846 
   43    MoSU017F_D05_BE352570Ta14P023C06P005A091F1_041.ab1     6 
  455  C MoSU017R_D05_BE352570Ta14P023C06P005A091R1_041.ab1   392 
Contig length: old 846, new 846

Contig length: old 846, new 846
New start: 0