No. words: 1461; after pruning: 1435


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:805)  641  0.00 0.00 0.00  MoSU017F_E05_BE352570Ta15P023C06P005A091F1_039.ab1       16   670 (0)  C MoSU017R_E05_BE352570Ta15P023C06P005A091R1_039.ab1   (0)   791   137 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1    MoSU017F_E05_BE352570Ta15P023C06P005A091F1_039.ab1     1 
   91  C MoSU017R_E05_BE352570Ta15P023C06P005A091R1_039.ab1   716 
   95    MoSU017F_E05_BE352570Ta15P023C06P005A091F1_039.ab1    95 
  383  C MoSU017R_E05_BE352570Ta15P023C06P005A091R1_039.ab1   424 
  387    MoSU017F_E05_BE352570Ta15P023C06P005A091F1_039.ab1   387 
  415  C MoSU017R_E05_BE352570Ta15P023C06P005A091R1_039.ab1   392 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0