No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:620)  588  0.00 0.16 0.16  MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1        1   621 (68)  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   (37)   621     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   658 
   59    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1    21 
   63  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   596 
   67    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1    29 
   71  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   588 
   79    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1    41 
   99  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   560 
  103    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1    65 
  123  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   536 
  131    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1    93 
  171  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   488 
  175    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   137 
  339  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   320 
  527    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   489 
  531  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   128 
  539    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   501 
  543  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   116 
  555    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   517 
  559  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1   100 
  635    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   597 
  639  C MoSU017R_F08_BE352570Ta16P005A03P023B071R1_054.ab1    20 
  643    MoSU017F_F08_BE352570Ta16P005A03P023B071F1_054.ab1   605 
Contig length: old 726, new 727

Contig length: old 727, new 727
New start: 0