No. words: 497; after pruning: 471


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 2.6 (1,1:197)  184  0.00 0.00 0.53  MoSU031F_H08_BE352570Ta16P024C07P015G091F1_050.ab1        6   195 (56)  C MoSU031R_H08_BE352570Ta16P024C07P015G091R1_050.ab1   (54)   192     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  94 nodes

 49 str. conn. components

Path
    1  C MoSU031R_H08_BE352570Ta16P024C07P015G091R1_050.ab1   246 
  102    MoSU031F_H08_BE352570Ta16P024C07P015G091F1_050.ab1    53 
  106  C MoSU031R_H08_BE352570Ta16P024C07P015G091R1_050.ab1   141 
  118    MoSU031F_H08_BE352570Ta16P024C07P015G091F1_050.ab1    69 
  122  C MoSU031R_H08_BE352570Ta16P024C07P015G091R1_050.ab1   125 
  174    MoSU031F_H08_BE352570Ta16P024C07P015G091F1_050.ab1   125 
Contig length: old 299, new 300

Contig length: old 300, new 300
New start: 0