No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:611)  578  0.00 0.16 0.16  MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1        1   612 (63)  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   (50)   612     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   662 
   71    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1    20 
   79  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   584 
   87    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1    36 
  103  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   560 
  111    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1    60 
  127  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   536 
  135    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1    84 
  175  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   488 
  183    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   132 
  195  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   468 
  523    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   472 
  527  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   136 
  539    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   488 
  543  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1   120 
  559    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   508 
  567  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1    96 
  631    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   580 
  635  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1    28 
  639    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   588 
  643  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1    20 
  647    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   596 
  656  C MoSU017R_G08_BE352570Ta17P005A03P023B071R1_052.ab1     8 
  660    MoSU017F_G08_BE352570Ta17P005A03P023B071F1_052.ab1   609 
Contig length: old 725, new 726

Contig length: old 726, new 726
New start: 0