No. words: 1582; after pruning: 1556


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 15.4 (1,1:771)  741  0.00 0.00 0.13  MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1        1   769 (22)  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   (20)   771     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   791 
   39    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1    19 
   43  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   749 
   63    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1    43 
  139  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   653 
  143    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1   123 
  615  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   177 
  635    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1   615 
  639  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1   153 
  751    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1   731 
  759  C MoSU017R_E10_BE352570Ta17P005A03P023G071R1_072.ab1    34 
  767    MoSU017F_E10_BE352570Ta17P005A03P023G071F1_072.ab1   747 
Contig length: old 810, new 811

Contig length: old 811, new 811
New start: 0