No. words: 1308; after pruning: 1282


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:799)  489  0.00 0.20 0.00  MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1        6   512 (0)  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   (0)   796   289 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1     1 
  176  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   625 
  184    MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1   184 
  252  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   549 
  260    MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1   260 
  264  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   537 
  268    MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1   268 
  280  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   521 
  292    MoSU017F_H05_BE352570Ta18P023C06P005A091F1_033.ab1   292 
  296  C MoSU017R_H05_BE352570Ta18P023C06P005A091R1_033.ab1   505 
Contig length: old 800, new 800

Contig length: old 800, new 800
New start: 0