No. words: 1357; after pruning: 1331


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:631)  595  0.00 0.16 0.32  MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1        1   633 (51)  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   (41)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   673 
   62    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    20 
   66  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   608 
   70    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    28 
   78  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   596 
   82    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    40 
   94  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   580 
   98    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    56 
  102  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   572 
  110    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    68 
  126  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   548 
  138    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1    96 
  174  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   500 
  186    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1   144 
  338  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   336 
  538    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1   496 
  546  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1   128 
  558    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1   516 
  602  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1    72 
  610    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1   568 
  626  C MoSU017R_A09_BE352570Ta19P005A03P023B071R1_079.ab1    48 
  630    MoSU017F_A09_BE352570Ta19P005A03P023B071F1_079.ab1   588 
Contig length: old 725, new 726

Contig length: old 726, new 726
New start: 0