No. words: 1550; after pruning: 1524


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.9 (1,1:798)  700  0.00 0.00 0.00  MoSU017F_B06_BE352570Ta20P023C06P005A091F1_046.ab1        1   717 (0)  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   (34)   799    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   833 
   42    MoSU017F_B06_BE352570Ta20P023C06P005A091F1_046.ab1     8 
   50  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   784 
   58    MoSU017F_B06_BE352570Ta20P023C06P005A091F1_046.ab1    24 
  342  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   492 
  346    MoSU017F_B06_BE352570Ta20P023C06P005A091F1_046.ab1   312 
  386  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   448 
  418    MoSU017F_B06_BE352570Ta20P023C06P005A091F1_046.ab1   384 
  442  C MoSU017R_B06_BE352570Ta20P023C06P005A091R1_046.ab1   392 
Contig length: old 833, new 833

Contig length: old 833, new 833
New start: 0