No. words: 1597; after pruning: 1571


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.4 (1,1:807)  723  0.13 0.00 0.00  MoSU017F_C06_BE352570Ta21P023C06P005A091F1_044.ab1        1   744 (0)  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   (45)   808    65 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   853 
   49    MoSU017F_C06_BE352570Ta21P023C06P005A091F1_044.ab1     4 
  493  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   361 
  549    MoSU017F_C06_BE352570Ta21P023C06P005A091F1_044.ab1   504 
  561  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   293 
  581    MoSU017F_C06_BE352570Ta21P023C06P005A091F1_044.ab1   536 
  609  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   245 
  641    MoSU017F_C06_BE352570Ta21P023C06P005A091F1_044.ab1   596 
  649  C MoSU017R_C06_BE352570Ta21P023C06P005A091R1_044.ab1   205 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0