No. words: 1334; after pruning: 1308


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:608)  576  0.49 0.00 0.00  MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1        1   609 (54)  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   (62)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   671 
  314    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   252 
  414  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   258 
  418    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   356 
  422  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   250 
  430    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   368 
  442  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   230 
  446    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   384 
  478  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1   194 
  482    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   420 
  614  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1    58 
  618    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   556 
  622  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1    50 
  642    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   580 
  646  C MoSU017R_D09_BE352570Ta22P005A03P023B071R1_073.ab1    26 
  666    MoSU017F_D09_BE352570Ta22P005A03P023B071F1_073.ab1   604 
Contig length: old 725, new 725

Contig length: old 725, new 725
New start: 0