No. words: 1646; after pruning: 1620


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:789)  766  0.00 0.00 0.13  MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1        1   790 (32)  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   (35)   789     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   824 
   39    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1     4 
  455  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   370 
  479    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   444 
  487  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   338 
  527    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   492 
  539  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   286 
  547    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   512 
  591  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   234 
  595    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   560 
  623  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   202 
  639    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   604 
  643  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1   182 
  807    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   772 
  815  C MoSU017R_D06_BE352570Ta22P023C06P005A091R1_042.ab1    11 
  819    MoSU017F_D06_BE352570Ta22P023C06P005A091F1_042.ab1   784 
Contig length: old 856, new 857

Contig length: old 857, new 857
New start: 0