No. words: 1037; after pruning: 1011


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:603)  349  0.26 0.00 0.79  MoSU017F_E09_BE352570Ta23P005A03P023B071F1_071.ab1        1   379 (0)  C MoSU017R_E09_BE352570Ta23P005A03P023B071R1_071.ab1   (55)   603   228 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C MoSU017R_E09_BE352570Ta23P005A03P023B071R1_071.ab1   658 
   59    MoSU017F_E09_BE352570Ta23P005A03P023B071F1_071.ab1     4 
  201  C MoSU017R_E09_BE352570Ta23P005A03P023B071R1_071.ab1   458 
  209    MoSU017F_E09_BE352570Ta23P005A03P023B071F1_071.ab1   154 
  229  C MoSU017R_E09_BE352570Ta23P005A03P023B071R1_071.ab1   430 
  237    MoSU017F_E09_BE352570Ta23P005A03P023B071F1_071.ab1   182 
  269  C MoSU017R_E09_BE352570Ta23P005A03P023B071R1_071.ab1   390 
Contig length: old 658, new 658

Contig length: old 658, new 658
New start: 0