No. words: 1674; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:800)  774  0.00 0.00 0.25  MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1        1   802 (35)  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   (37)   800     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   837 
   41    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1     4 
  125  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   713 
  129    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1    92 
  565  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   273 
  573    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   536 
  589  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   249 
  593    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   556 
  629  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   209 
  641    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   604 
  653  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   185 
  661    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   624 
  669  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1   169 
  809    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   772 
  817  C MoSU017R_E06_BE352570Ta23P023C06P005A091R1_040.ab1    22 
  833    MoSU017F_E06_BE352570Ta23P023C06P005A091F1_040.ab1   797 
Contig length: old 873, new 873

Contig length: old 873, new 873
New start: 0