No. words: 1048; after pruning: 1022


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:603)  387  1.84 0.00 0.23  MoSU017F_G06_BE352570Td01P005A03P023B071F1_036.ab1      172   605 (10)  C MoSU017R_G06_BE352570Td01P005A03P023B071R1_036.ab1   (0)   433     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1    MoSU017F_G06_BE352570Td01P005A03P023B071F1_036.ab1     1 
  331  C MoSU017R_G06_BE352570Td01P005A03P023B071R1_036.ab1   274 
  335    MoSU017F_G06_BE352570Td01P005A03P023B071F1_036.ab1   335 
  351  C MoSU017R_G06_BE352570Td01P005A03P023B071R1_036.ab1   254 
  601    MoSU017F_G06_BE352570Td01P005A03P023B071F1_036.ab1   602 
Contig length: old 615, new 614

Contig length: old 614, new 614
New start: 0