No. words: 472; after pruning: 446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:167)  167  0.00 0.00 0.00  MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1        1   168 (79)  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1   (57)   168     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1   225 
  101    MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1    44 
  125  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1   101 
  153    MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1    96 
  157  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1    69 
  173    MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1   116 
  181  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1    45 
  185    MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1   128 
  197  C MoSU031R_B07_BE352570Td02P024C07P015G091R1_061.ab1    29 
  205    MoSU031F_B07_BE352570Td02P024C07P015G091F1_061.ab1   148 
Contig length: old 304, new 304

Contig length: old 304, new 304
New start: 0