No. words: 1510; after pruning: 1470


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 14.3 (1,1:803)  651  0.15 0.15 0.15  MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1        2   679 (0)  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   (28)   803   126 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   831 
   39    MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1    11 
   49  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   783 
   57    MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1    29 
   65  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   767 
   81    MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1    54 
  289  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   543 
  301    MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1   274 
  337  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   495 
  425    MoSU017F_B04_BE352570Td04P023C06P005A091F1_030.ab1   398 
  437  C MoSU017R_B04_BE352570Td04P023C06P005A091R1_030.ab1   395 
Contig length: old 831, new 831

Contig length: old 831, new 831
New start: 0