No. words: 1455; after pruning: 1429


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:803)  617  1.08 0.00 0.00  MoSU017F_E04_BE352570Td07P023C06P005A091F1_024.ab1       48   698 (0)  C MoSU017R_E04_BE352570Td07P023C06P005A091R1_024.ab1   (0)   757   107 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    MoSU017F_E04_BE352570Td07P023C06P005A091F1_024.ab1     1 
  384  C MoSU017R_E04_BE352570Td07P023C06P005A091R1_024.ab1   421 
  424    MoSU017F_E04_BE352570Td07P023C06P005A091F1_024.ab1   424 
  428  C MoSU017R_E04_BE352570Td07P023C06P005A091R1_024.ab1   377 
Contig length: old 804, new 804

Contig length: old 804, new 804
New start: 0