No. words: 1354; after pruning: 1328


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:609)  581  0.00 0.00 0.16  MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1        1   610 (66)  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   (69)   609     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   678 
  145    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1    76 
  149  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   530 
  205    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   136 
  225  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   454 
  305    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   236 
  313  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   366 
  541    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   472 
  545  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   134 
  549    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   480 
  553  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   126 
  569    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   500 
  573  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1   106 
  649    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   580 
  653  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1    26 
  657    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   588 
  665  C MoSU017R_F07_BE352570Td08P005A03P023B071R1_053.ab1    15 
  669    MoSU017F_F07_BE352570Td08P005A03P023B071F1_053.ab1   600 
Contig length: old 744, new 745

Contig length: old 745, new 745
New start: 0