No. words: 1066; after pruning: 1040


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.9 (1,1:806)  240  1.93 0.00 0.00  MoSU017F_G04_BE352570Td09P023C06P005A091F1_020.ab1      168   426 (0)  C MoSU017R_G04_BE352570Td09P023C06P005A091R1_020.ab1   (0)   640   382 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  118 nodes

 61 str. conn. components

Path
    1    MoSU017F_G04_BE352570Td09P023C06P005A091F1_020.ab1     1 
  305  C MoSU017R_G04_BE352570Td09P023C06P005A091R1_020.ab1   503 
  309    MoSU017F_G04_BE352570Td09P023C06P005A091F1_020.ab1   309 
  313  C MoSU017R_G04_BE352570Td09P023C06P005A091R1_020.ab1   495 
  353    MoSU017F_G04_BE352570Td09P023C06P005A091F1_020.ab1   353 
  357  C MoSU017R_G04_BE352570Td09P023C06P005A091R1_020.ab1   451 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0