No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.3 (1,1:1184)  149  1.23 0.00 0.00  MoSU003F_B05_BE352570Tu02P005A03A091F1_041.ab1      443   604 (0)  C MoSU003R_B05_BE352570Tu02P005A03A091R1_041.ab1   (0)   743   582 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  78 nodes

 41 str. conn. components

Path
    1    MoSU003F_B05_BE352570Tu02P005A03A091F1_041.ab1     1 
  462  C MoSU003R_B05_BE352570Tu02P005A03A091R1_041.ab1   724 
  470    MoSU003F_B05_BE352570Tu02P005A03A091F1_041.ab1   470 
  482  C MoSU003R_B05_BE352570Tu02P005A03A091R1_041.ab1   704 
  494    MoSU003F_B05_BE352570Tu02P005A03A091F1_041.ab1   494 
  514  C MoSU003R_B05_BE352570Tu02P005A03A091R1_041.ab1   672 
  518    MoSU003F_B05_BE352570Tu02P005A03A091F1_041.ab1   518 
  522  C MoSU003R_B05_BE352570Tu02P005A03A091R1_041.ab1   664 
Contig length: old 1185, new 1185

Contig length: old 1185, new 1185
New start: 0